BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D02LP1|AL427887
(959 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1465 0.0
>3x_Contig1794
Length = 36744
Score = 1465 bits (738), Expect = 0.0
Identities = 878/926 (94%)
Strand = Plus / Plus
Query: 20 agaggacatatcctgcaaataagcagctttatcctcccttagtctgaccggattatattt 79
|||||| |||||||||||||||||||||||||||| | ||||| |||| |||||||||||
Sbjct: 25032 agaggagatatcctgcaaataagcagctttatcctgcgttagtgtgacgggattatattt 25091
Query: 80 ctcctttgggcctgacagcggttgagtagcatcgaacccgacatcttccggtttcaaacc 139
| |||||||||||||| ||||||||||||| ||||||||||| ||| ||||| ||| |
Sbjct: 25092 ttggtttgggcctgacaggggttgagtagcatggaacccgacatgttcgggtttgaaagc 25151
Query: 140 caatctttccatctcttggatctgaacctcgtccatttccctatgacttgtatcgggccc 199
|||| ||||||| | |||||| ||||| |||| |||| | ||||||||||||||||| |
Sbjct: 25152 caatgtttccatgttttggatttgaacgtcgtggattttcttatgacttgtatcgggcgc 25211
Query: 200 cttatgattcctttcaatctcctttatatcaggcgtgtacccataccaccgatctctttt 259
||||||||||||| ||| | ||||||| ||| ||||| ||||||||| ||| | ||||
Sbjct: 25212 gttatgattcctttgaatgtggtttatatgaggggtgtagccataccacggatgtgtttt 25271
Query: 260 cgcatcataattcgactcaataactttctcgtcacgtcttcgtactggggcgtccaaatc 319
|||| ||||||||| | ||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 25272 ggcattataattcgagttaataagtttttcgtcacgtattcgtactggggcgtccaaatt 25331
Query: 320 taggtcatatgaatccttcttcttacggttccttccactaggccttacataagtkaatgc 379
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 25332 taggtcatatgaatccttcttcttacggttccttccactaggccttacataagtgaatgc 25391
Query: 380 atcatcgatttctgccgtccctgaatcggggactgaacttttctttagcctatggtggga 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25392 atcatcgatttctgccgtccctgaatcggggactgaacttttctttagcctatggtggga 25451
Query: 440 taagtaatctttttcttctaattcagtgccggtaccagtaccggtaccagaaatggtact 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25452 taagtaatctttttcttctaattcagtgccggtaccagtaccggtaccagaaatggtact 25511
Query: 500 gttactgttaatggcactggtactggcacttacttcactttcttctgccaaataccatgg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25512 gttactgttaatggcactggtactggcacttacttcactttcttctgccaaataccatgg 25571
Query: 560 cttgttcttgataaaattcggtatatgttcgttctggcccggtttcccacgcgaaccacc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25572 cttgttcttgataaaattcggtatatgttcgttctggcccggtttcccacgcgaaccacc 25631
Query: 620 acggttaccacgcgctccagaattacccctacgcatcacgaaactccgtacttaacttgg 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25632 acggttaccacgcgctccagaattacccctacgcatcacgaaactccgtacttaacttgg 25691
Query: 680 tctcttaggttcatcaaacctcagtgccccccaaacctttatctggtaacatcagcgaga 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25692 tctcttaggttcatcaaacctcagtgccccccaaacctttatctggtaacatcagcgaga 25751
Query: 740 gagagagaggtcagataatgcgaaatgctatttctcactttggcagcaacttgaaatatt 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25752 gagagagaggtcagataatgcgaaatgctatttctcactttggcagcaacttgaaatatt 25811
Query: 800 atttctttttcacatttttcgtacagaaactacagaaggaacaacaagcatacacaatgt 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25812 atttctttttcacatttttcgtacagaaactacagaaggaacaacaagcatacacaatgt 25871
Query: 860 gcaatatatacgcatattgacaagaaaacgagttctcgagagagaaacagcgaaccgaag 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25872 gcaatatatacgcatattgacaagaaaacgagttctcgagagagaaacagcgaaccgaag 25931
Query: 920 gagaactaaarggaaatagggcctga 945
| ||||||| | |||||||||||||
Sbjct: 25932 ggaaactaaaggaaaatagggcctga 25957
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6418
Number of Sequences: 1807
Number of extensions: 6418
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)